NGS data analysis

NGS data analysis through command line approach:

 

More example batch scripts and NGS data analysis pipelines:

Scripts to perform RNASeq data analysis using HISAT2 + Stringtie are available under

/ihome/sam/fangping/example/RNASeq_HISAT2_Stringtie

You can follow the readme file to go through the steps.

 

If you need personalized consultation for NGS data analysis workflow and selection of better pipelines, please submit a ticket or contact Fangping Mu, PhD.