NGS data analysis

NGS data analysis through command line approach:


More example batch scripts and NGS data analysis pipelines:

Scripts to perform RNASeq data analysis using HISAT2 + Stringtie are available under


You can follow the readme file to go through the steps.


If you need personalized consultation for NGS data analysis workflow and selection of better pipelines, please submit a ticket or contact Fangping Mu, PhD.